1PN9 Transferase date Jun 12, 2003
title Crystal Structure Of An Insect Delta-Class Glutathione S-Tra From A Ddt-Resistant Strain Of The Malaria Vector Anopheles
authors L.Chen, P.R.Hall, X.E.Zhou, H.Ranson, J.Hemingway, E.J.Meehan
compound source
Molecule: Glutathione S-Transferase 1-6
Chain: A, B
Synonym: Gst Class-Delta
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Anopheles Gambiae
Organism_common: African Malaria Mosquito
Organism_taxid: 7165
Gene: Gst1-6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pxaggst1-6
symmetry Space Group: P 21 21 21
R_factor 0.209 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.200 89.400 100.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand GTX enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 1JLV, 1JLW
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of an insect delta-class glutathione S-transferase from a DDT-resistant strain of the malaria vector Anopheles gambiae., Chen L, Hall PR, Zhou XE, Ranson H, Hemingway J, Meehan EJ, Acta Crystallogr D Biol Crystallogr 2003 Dec;59(Pt 12):2211-7. PMID:14646079
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1pn9.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 1PN9
  • CSU: Contacts of Structural Units for 1PN9
  • Likely Quarternary Molecular Structure file(s) for 1PN9
  • Structure Factors (266 Kb)
  • Retrieve 1PN9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PN9 from S2C, [Save to disk]
  • Re-refined 1pn9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1PN9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PN9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PN9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pn9a2, region A:1-83 [Jmol] [rasmolscript] [script source]
        - Domain d1pn9a1, region A:84-209 [Jmol] [rasmolscript] [script source]
        - Domain d1pn9b2, region B:1-83 [Jmol] [rasmolscript] [script source]
        - Domain d1pn9b1, region B:84-209 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pn9_A] [1pn9] [1pn9_B]
  • SWISS-PROT database: [Q93113]
  • Domain organization of [GST1D_ANOGA] by SWISSPFAM
  • Other resources with information on 1PN9
  • Community annotation for 1PN9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science