1PTR	Phosphotransferase	date	May 11, 1995
title	Protein Kinase C Delta Cys2 Domain Complexed With Phorbol-13
authors	G.Zhang, J.H.Hurley
compound		source
Molecule: Protein Kinase C Delta Type Chain: A Ec: 2.7.1.- Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.194 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 32.400 63.500 65.500 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	PRB, ZN	enzyme	Transferase E.C.2.7.1 BRENDA
related structures	by homologous chain: 1PTQ, 1TBN
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the cys2 activator-binding domain of protein kinase C delta in complex with phorbol ester., Zhang G, Kazanietz MG, Blumberg PM, Hurley JH, Cell 1995 Jun 16;81(6):917-24. PMID:7781068

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (13 Kb) [Save to disk] Biological Unit Coordinates (1ptr.pdb1.gz) 17 Kb LPC: Ligand-Protein Contacts for 1PTR CSU: Contacts of Structural Units for 1PTR Likely Quarternary Molecular Structure file(s) for 1PTR Retrieve 1PTR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1PTR from S2C, [Save to disk]

View 1PTR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1PTR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1PTR, from MSDmotif at EBI Genome occurence of 1PTR's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ptr__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ptr_A] [1ptr] SWISS-PROT database: [P28867] Domain organization of [KPCD_MOUSE] by SWISSPFAM Domain found in 1PTR: [C1 ] by SMART

Other resources with information on 1PTR

Community annotation for 1PTR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---