1PUO Crystal structure of Fel d 1- the major cat allergen date
authors Kaiser, L., Gronlund, H., Sandalova, T., Ljunggren, H.G., Hage-Hamsten, M.van., Achour, A., Schneider, G.
compound source
symmetry
R_factor
R_Free 0.23731
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand MPD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of the major cat allergen Fel d 1, a member of the secretoglobin family., Kaiser L, Gronlund H, Sandalova T, Ljunggren HG, van Hage-Hamsten M, Achour A, Schneider G, J Biol Chem 2003 Sep 26;278(39):37730-5. Epub 2003 Jul 8. PMID:12851385
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1puo.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (1puo.pdb2.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 1PUO
  • CSU: Contacts of Structural Units for 1PUO
  • Likely Quarternary Molecular Structure file(s) for 1PUO
  • Structure Factors (199 Kb)
  • Retrieve 1PUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PUO from S2C, [Save to disk]
  • Re-refined 1puo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1PUO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PUO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1puoa2, region A:5-73 [Jmol] [rasmolscript] [script source]
        - Domain d1puoa1, region A:93-164 [Jmol] [rasmolscript] [script source]
        - Domain d1puob2, region B:5-74 [Jmol] [rasmolscript] [script source]
        - Domain d1puob1, region B:93-164 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1puo_B] [1puo] [1puo_A]
  • SWISS-PROT database: [P30438] [P30440]
  • Domain organization of [FEL1A_FELCA] [FEL1B_FELCA] by SWISSPFAM
  • Domain found in 1PUO: [UTG ] by SMART
    • Other resources with information on 1PUO
  • Community annotation for 1PUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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