1PVA Calcium Binding date Jan 16, 1995
title Comparison Between The Crystal And The Solution Structures Of The Ef Hand Parvalbumin (Alpha Component From Pike Muscle)
authors J.P.Declercq, B.Tinant, F.Roquet, J.Rambaud, J.Parello
compound source
Molecule: Parvalbumin
Chain: A, B
Engineered: Yes
 Organism_scientific: Esox Lucius
Organism_common: Northern Pike
Organism_taxid: 8010
symmetry Space Group: P 21 21 2
R_factor 0.196 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.700 45.070 81.810 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand ACE, CA enzyme
related structures by homologous chain: 5CPV
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1pva.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (1pva.pdb2.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1PVA
  • CSU: Contacts of Structural Units for 1PVA
  • Likely Quarternary Molecular Structure file(s) for 1PVA
  • Structure Factors (337 Kb)
  • Retrieve 1PVA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PVA from S2C, [Save to disk]
  • Re-refined 1pva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PVA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1PVA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PVA, from MSDmotif at EBI
  • Genome occurence of 1PVA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pvaa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1pvab_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pva] [1pva_A] [1pva_B]
  • SWISS-PROT database: [P02628]
  • Domain organization of [PRVA_ESOLU] by SWISSPFAM
  • Domain found in 1PVA: [EFh ] by SMART
    • Other resources with information on 1PVA
  • Community annotation for 1PVA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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