1Q6Z	Lyase	date	Aug 14, 2003
title	High Resolution Structure Of E28a Mutant Benzoylformate Deca From Pseudomonas Putida Complexed With Thiamin Thiazolone D
authors	A.K.Bera, M.S.Hasson
compound		source
Molecule: Benzoylformate Decarboxylase Chain: A Synonym: Bfd, Bfdc Ec: 4.1.1.7 Engineered: Yes Mutation: Yes		Organism_scientific: Pseudomonas Putida Organism_taxid: 303 Strain: Rf4738 Atcc: 12633 Gene: Mdlc Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm105 Expression_system_vector_type: Plasmid Expression_system_plasmid: Prep7 Expression_system_gene: Mdlc
symmetry	Space Group: I 2 2 2	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.371 95.600 136.881 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.00 Å
ligand	CA, MG, TZD	enzyme	Lyase E.C.4.1.1.7 BRENDA
related structures	by homologous chain: 1PO7
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk] Biological Unit Coordinates (1q6z.pdb1.gz) 358 Kb LPC: Ligand-Protein Contacts for 1Q6Z CSU: Contacts of Structural Units for 1Q6Z Likely Quarternary Molecular Structure file(s) for 1Q6Z Structure Factors (4423 Kb) Retrieve 1Q6Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Q6Z from S2C, [Save to disk] Re-refined 1q6z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Q6Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Q6Z

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1Q6Z from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Q6Z, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1q6za1, region A:182-341 [Jmol] [rasmolscript] [script source]     - Domain d1q6za2, region A:2-181 [Jmol] [rasmolscript] [script source]     - Domain d1q6za3, region A:342-524 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1q6z_A] [1q6z] SWISS-PROT database: [P20906] Domain organization of [MDLC_PSEPU] by SWISSPFAM

Other resources with information on 1Q6Z

Community annotation for 1Q6Z at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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