1QDL Lyase date May 20, 1999
title The Crystal Structure Of Anthranilate Synthase From Sulfolob Solfataricus
authors T.Knoechel, A.Ivens, G.Hester, A.Gonzalez, R.Bauerle, M.Wilmanns, K.Kirschner, J.N.Jansonius
compound source
Molecule: Protein (Anthranilate Synthase (Trpe-Subunit))
Chain: A
Fragment: Aminodeoxyisochorismate Synthaselyase Subunit
Ec: 4.1.3.27
Engineered: Yes
Other_details: Contains Residues Gly-3,Ser-2, His-1 Prior T Initiating Methionine;
Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 2287
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet15b

Molecule: Protein (Anthranilate Synthase (Trpg-Subunit))
Chain: B
Fragment: Glutamine Amidotransferase Subunit
Ec: 4.1.3.27
Engineered: Yes

Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 2287
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet15b
symmetry Space Group: P 63 2 2
R_factor 0.226 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
162.000 162.000 212.350 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Lyase E.C.4.1.3.27 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceThe crystal structure of anthranilate synthase from Sulfolobus solfataricus: functional implications., Knochel T, Ivens A, Hester G, Gonzalez A, Bauerle R, Wilmanns M, Kirschner K, Jansonius JN, Proc Natl Acad Sci U S A 1999 Aug 17;96(17):9479-84. PMID:10449718
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (1qdl.pdb1.gz) 197 Kb
  • CSU: Contacts of Structural Units for 1QDL
  • Likely Quarternary Molecular Structure file(s) for 1QDL
  • Structure Factors (624 Kb)
  • Retrieve 1QDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QDL from S2C, [Save to disk]
  • Re-refined 1qdl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QDL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QDL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qdla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1qdlb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qdl] [1qdl_A] [1qdl_B]
  • SWISS-PROT database: [Q06128] [Q06129]
  • Domain organization of [TRPE_SULSO] [TRPG_SULSO] by SWISSPFAM
  • Other resources with information on 1QDL
  • Community annotation for 1QDL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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