1QGE Hydrolase date Apr 23, 1999
title New Crystal Form Of Pseudomonas Glumae (Formerly Chromobacte Viscosum Atcc 6918) Lipase
authors D.A.Lang, P.Stadler, A.Kovacs, F.Paltauf, B.W.Dijkstra
compound source
Molecule: Protein (Triacylglycerol Hydrolase)
Chain: D
Ec: 3.1.1.3
Other_details: Chain Break From V 220 - G 222
 Organism_scientific: Burkholderia Glumae
Organism_taxid: 337
Strain: Chromobacterium Viscosum
Atcc: 6918
Collection: 6918
Cellular_location: Extracellular
Other_details: Atcc

Molecule: Protein (Triacylglycerol Hydrolase)
Chain: E
Ec: 3.1.1.3
Organism_scientific: Burkholderia Glumae
Organism_taxid: 337
Strain: Chromobacterium Viscosum
Atcc: 6918
Collection: 6918
Cellular_location: Extracellular
Other_details: Atcc
symmetry Space Group: P 21 21 21
R_factor 0.187 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.980 43.350 140.690 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CA enzyme Hydrolase E.C.3.1.1.3 BRENDA
related structures by homologous chain: 1CVL, 4LIP
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1qge.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 1QGE
  • CSU: Contacts of Structural Units for 1QGE
  • Likely Quarternary Molecular Structure file(s) for 1QGE
  • Retrieve 1QGE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QGE from S2C, [Save to disk]
    • View 1QGE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QGE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QGE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qge.1, region D:,E [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qge_E] [1qge_D] [1qge]
  • SWISS-PROT database: [Q05489]
  • Domain organization of [LIP_BURGL] by SWISSPFAM
    • Other resources with information on 1QGE
  • Community annotation for 1QGE at PDBWiki (http://pdbwiki.org)
  • LED, table of lipase structures from Lipase Engineering Database.
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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