1QGX	Hydrolase	date	May 10, 1999
title	X-Ray Structure Of Yeast Hal2p
authors	A.Albert, L.Yenush, M.R.Gil-Mascarell, P.L.Rodriguez, J.Patel, M. Ripoll, T.L.Blundell, R.Serrano
compound		source
Molecule: 3',5'-Adenosine Bisphosphatase Chain: A Synonym: Pap Phosphatase Ec: 3.1.3.7 Engineered: Yes Other_details: Complexed With Amp		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932
symmetry	Space Group: P 1 21 1	R_factor 0.197 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.680 44.910 71.600 90.00 111.08 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	AMP, BME, MG, PO4, SO4	enzyme	Hydrolase E.C.3.1.3.7 BRENDA
related structures	by homologous chain: 1K9Z, 1KA0
Gene Ontology	Chain Function Process Component A
Primary reference	X-ray structure of yeast Hal2p, a major target of lithium and sodium toxicity, and identification of framework interactions determining cation sensitivity., Albert A, Yenush L, Gil-Mascarell MR, Rodriguez PL, Patel S, Martinez-Ripoll M, Blundell TL, Serrano R, J Mol Biol 2000 Jan 28;295(4):927-38. PMID:10656801

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (1qgx.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 1QGX CSU: Contacts of Structural Units for 1QGX Likely Quarternary Molecular Structure file(s) for 1QGX Structure Factors (310 Kb) Retrieve 1QGX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1QGX from S2C, [Save to disk] Re-refined 1qgx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1QGX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1QGX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1QGX, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1qgxa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qgx_A] [1qgx] SWISS-PROT database: [P32179] Domain organization of [HAL2_YEAST] by SWISSPFAM

Other resources with information on 1QGX

Community annotation for 1QGX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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