1QPJ Transferase date May 25, 1999
title Crystal Structure Of The Lymphocyte-Specific Kinase Lck In C With Staurosporine.
authors X.Zhu, J.L.Kim, P.E.Rose, D.R.Stover, L.M.Toledo
compound source
Molecule: Lck Tyrosine Kinase
Chain: A
Fragment: Catalytic Domain
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Lymphocyte
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_vector_type: Plasmid
Expression_system_vector: Baculovirus
Expression_system_plasmid: Pfastbac1
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.540 69.040 73.730 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand PTR, SO4, STU BindingDB enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1QCF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural analysis of the lymphocyte-specific kinase Lck in complex with non-selective and Src family selective kinase inhibitors., Zhu X, Kim JL, Newcomb JR, Rose PE, Stover DR, Toledo LM, Zhao H, Morgenstern KA, Structure Fold Des 1999 Jun 15;7(6):651-61. PMID:10404594
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1qpj.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1QPJ
  • CSU: Contacts of Structural Units for 1QPJ
  • Likely Quarternary Molecular Structure file(s) for 1QPJ
  • Retrieve 1QPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QPJ from S2C, [Save to disk]
  • View 1QPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QPJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QPJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qpja_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qpj_A] [1qpj]
  • SWISS-PROT database: [P06239]
  • Domain organization of [LCK_HUMAN] by SWISSPFAM
  • Domain found in 1QPJ: [TyrKc ] by SMART
  • Other resources with information on 1QPJ
  • Community annotation for 1QPJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science