1QVU Transcription date Aug 28, 2003
title Crystal Structure Of The Multidrug Binding Transcriptional R Qacr Bound To Two Drugs: Ethidium And Proflavine
authors M.A.Schumacher, M.C.Miller, R.G.Brennan
compound source
Molecule: Transcriptional Regulator Qacr
Chain: B, D, A, E
Fragment: Qacr
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Gene: Qacr Or Savp031
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.223 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
171.800 171.800 94.590 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.96 Å
ligand ET, PRL enzyme
related structures by homologous chain: 1JTY, 1JUP
Gene
Ontology
ChainFunctionProcessComponent
A, D, E, B


Primary referenceStructural mechanism of the simultaneous binding of two drugs to a multidrug-binding protein., Schumacher MA, Miller MC, Brennan RG, EMBO J 2004 Aug 4;23(15):2923-30. Epub 2004 Jul 15. PMID:15257299
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (1qvu.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (1qvu.pdb2.gz) 62 Kb
  • Biological Unit Coordinates (1qvu.pdb3.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 1QVU
  • CSU: Contacts of Structural Units for 1QVU
  • Likely Quarternary Molecular Structure file(s) for 1QVU
  • Structure Factors (369 Kb)
  • Retrieve 1QVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QVU from S2C, [Save to disk]
  • Re-refined 1qvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QVU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QVU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qvua1, region A:2-72 [Jmol] [rasmolscript] [script source]
        - Domain d1qvua2, region A:73-187 [Jmol] [rasmolscript] [script source]
        - Domain d1qvub1, region B:2-72 [Jmol] [rasmolscript] [script source]
        - Domain d1qvub2, region B:73-187 [Jmol] [rasmolscript] [script source]
        - Domain d1qvud1, region D:2-72 [Jmol] [rasmolscript] [script source]
        - Domain d1qvud2, region D:73-187 [Jmol] [rasmolscript] [script source]
        - Domain d1qvue1, region E:2-72 [Jmol] [rasmolscript] [script source]
        - Domain d1qvue2, region E:73-187 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qvu_E] [1qvu] [1qvu_D] [1qvu_B] [1qvu_A]
  • SWISS-PROT database: [P0A0N4]
  • Domain organization of [QACR_STAAU] by SWISSPFAM
    • Other resources with information on 1QVU
  • Community annotation for 1QVU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science