1QWK Oxidoreductase date Sep 02, 2003
title Structural Genomics Of Caenorhabditis Elegans: Hypothetical Protein (Aldose Reductase Family Member)
authors L.Chen, X.E.Zhou, E.J.Meehan, J.Symersky, S.Lu, S.Li, M.Luo, Southe Collaboratory For Structural Genomics (Secsg)
compound source
Molecule: Aldo-Keto Reductase Family 1 Member C1
Chain: A
Synonym: Aldose Reductase; Xh961; Hypothetical Protein C07d Hypothetical 35.2 Kda Protein;
Engineered: Yes
Organism_scientific: Caenorhabditis Elegans
Organism_taxid: 6239
Gene: C07d8.6
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest 17.1
symmetry Space Group: C 2 2 21
R_factor 0.200 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.050 89.570 116.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1qwk.pdb1.gz) 55 Kb
  • CSU: Contacts of Structural Units for 1QWK
  • Likely Quarternary Molecular Structure file(s) for 1QWK
  • Structure Factors (415 Kb)
  • Retrieve 1QWK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QWK from S2C, [Save to disk]
  • Re-refined 1qwk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QWK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QWK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QWK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qwka_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qwk] [1qwk_A]
  • SWISS-PROT database: [P91020]
  • Domain organization of [P91020_CAEEL] by SWISSPFAM
  • Other resources with information on 1QWK
  • Community annotation for 1QWK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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