1R1F Plant Protein date Sep 23, 2003
title Solution Structure Of The Cyclotide Palicourein: Implication Development Of Pharmaceutical And Agricultural Applications
authors D.G.Barry, N.L.Daly, H.R.Bokesch, K.R.Gustafson, D.J.Craik
compound source
Molecule: Palicourein
Chain: A
Organism_scientific: Palicourea Condensata
Organism_taxid: 272141
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the cyclotide palicourein: implications for the development of a pharmaceutical framework., Barry DG, Daly NL, Bokesch HR, Gustafson KR, Craik DJ, Structure (Camb) 2004 Jan;12(1):85-94. PMID:14725768
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (1r1f.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1R1F
  • Original NMR restraints for 1R1F from PDB
  • Retrieve 1R1F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1R1F from S2C, [Save to disk]
  • View 1R1F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1R1F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1R1F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1r1fa_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1r1f_A] [1r1f]
  • SWISS-PROT database: [P84645]
  • Domain organization of [PALIC_PALCO] by SWISSPFAM
  • Other resources with information on 1R1F
  • Community annotation for 1R1F at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science