1R8X	Transferase	date	Oct 28, 2003
title	Crystal Structure Of Mouse Glycine N-Methyltransferase (Tetr Form)
authors	S.Pakhomova, Z.Luka, C.Wagner, M.E.Newcomer
compound		source
Molecule: Glycine N-Methyltransferase Chain: A, B Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Gnmt Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet17b, Pmme
symmetry	Space Group: P 41 21 2	R_factor 0.207 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.700 70.700 266.030 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.95 Å
ligand	BME, TRS	enzyme
related structures	by homologous chain: 1KIA, 1NBI
Gene Ontology	Chain Function Process Component A, B
Primary reference	Glycine N-methyltransferases: a comparison of the crystal structures and kinetic properties of recombinant human, mouse and rat enzymes., Pakhomova S, Luka Z, Grohmann S, Wagner C, Newcomer ME, Proteins 2004 Nov 1;57(2):331-7. PMID:15340920

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk] Biological Unit Coordinates (1r8x.pdb1.gz) 171 Kb LPC: Ligand-Protein Contacts for 1R8X CSU: Contacts of Structural Units for 1R8X Likely Quarternary Molecular Structure file(s) for 1R8X Retrieve 1R8X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1R8X from S2C, [Save to disk]

View 1R8X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1R8X

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1R8X, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1r8xa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1r8xb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1r8x_B] [1r8x_A] [1r8x] SWISS-PROT database: [Q9QXF8] Domain organization of [GNMT_MOUSE] by SWISSPFAM

Other resources with information on 1R8X

Community annotation for 1R8X at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---