1REJ Transferase date Nov 06, 2003
title Crystal Structure Of Camp-Dependent Protein Kinase Complexed Balanol Analog 1
authors P.Akamine, Madhusudan, L.L.Brunton, H.D.Ou, J.M.Canaves, N.H.Xuon S.S.Taylor
compound source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su
Chain: A
Synonym: Pka C-Alpha
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Prkaca, Pkaca
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prsetb
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.500 72.100 97.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand B1L, SEP, TPO enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1Q8W, 1YDS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBalanol analogues probe specificity determinants and the conformational malleability of the cyclic 3',5'-adenosine monophosphate-dependent protein kinase catalytic subunit., Akamine P, Madhusudan, Brunton LL, Ou HD, Canaves JM, Xuong NH, Taylor SS, Biochemistry 2004 Jan 13;43(1):85-96. PMID:14705934
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1rej.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1REJ
  • CSU: Contacts of Structural Units for 1REJ
  • Likely Quarternary Molecular Structure file(s) for 1REJ
  • Retrieve 1REJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1REJ from S2C, [Save to disk]
  • View 1REJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1REJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1REJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1reja_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rej_A] [1rej]
  • SWISS-PROT database: [P05132]
  • Domain organization of [KAPCA_MOUSE] by SWISSPFAM
  • Domains found in 1REJ: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 1REJ
  • Community annotation for 1REJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science