1RF1 | Blood Clotting | date | Nov 07, 2003 |
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title | Crystal Structure Of Fragment D Of Gammae132a Fibrinogen Wit Peptide Ligand Gly-His-Arg-Pro-Amide | ||||||||||||||||||
authors | M.S.Kostelansky, O.V.Gorkun, S.T.Lord | ||||||||||||||||||
compound | source | ||||||||||||||||||
Molecule: Fibrinogen Alphaalpha-E Chain Chain: A, D Fragment: Fibrinogen Alphaalpha-E Chain Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fga Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho Expression_system_organ: Ovary Expression_system_vector_type: Plasmid Expression_system_plasmid: P767 | ||||||||||||||||||
Molecule: Fibrinogen Beta Chain Chain: B, E Fragment: Fibrinogen Bbeta Chain Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fgb Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho Expression_system_organ: Ovary Expression_system_vector_type: Plasmid Expression_system_plasmid: P767 | ||||||||||||||||||
Molecule: Fibrinogen Gamma Chain Chain: C, F Fragment: Fibrinogen Gamma Chain Synonym: Pro2061 Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fgg Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho Expression_system_organ: Ovary Expression_system_vector_type: Plasmid Expression_system_plasmid: P767 | ||||||||||||||||||
Molecule: Ghrp Peptide Chain: G, H, I, J Engineered: Yes |
Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. | ||||||||||||||||||
symmetry | Space Group: P 21 21 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.53 Å | ||||||||||||||||
ligand | CA, FUC, NAG | enzyme |
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related structures | by homologous chain: 1FZG, 1RE4 | ||||||||||||||||||
Gene Ontology |
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Primary reference | Calcium-binding site beta2, adjacent to the "b" polymerization site, modulates lateral aggregation of protofibrils during fibrin polymerization., Kostelansky MS, Lounes KC, Ping LF, Dickerson SK, Gorkun OV, Lord ST, Biochemistry 2004 Mar 9;43(9):2475-83. PMID:14992585 |
Data retrieval |
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Visual 3D analysis of 1RF1 |
Structure-derived information |
- Domain d1rf1a_, region A [Jmol] [rasmolscript] [script source] - Domain d1rf1b2, region B:161-199 [Jmol] [rasmolscript] [script source] - Domain d1rf1b1, region B:200-459 [Jmol] [rasmolscript] [script source] - Domain d1rf1c1, region C:142-393 [Jmol] [rasmolscript] [script source] - Domain d1rf1c2, region C:96-141 [Jmol] [rasmolscript] [script source] - Domain d1rf1d_, region D [Jmol] [rasmolscript] [script source] - Domain d1rf1e2, region E:165-199 [Jmol] [rasmolscript] [script source] - Domain d1rf1e1, region E:200-459 [Jmol] [rasmolscript] [script source] - Domain d1rf1f2, region F:103-141 [Jmol] [rasmolscript] [script source] - Domain d1rf1f1, region F:142-393 [Jmol] [rasmolscript] [script source] - Domain d1e1rf1, region F:358-474 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |