1RFX Hormone Growth Factor date Nov 10, 2003
title Crystal Structure Of Resisitin
authors S.D.Patel, M.W.Rajala, P.E.Scherer, L.Shapiro, S.K.Burley, New Yo Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Resistin
Chain: A, B, C
Synonym: Cysteine-Rich Secreted Protein Fizz3; Adipose Tiss Specific Secretory Factor; Adsf; Adipose-Specific Cysteine- Secreted Protein A12-Alpha;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Retn
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfm1
symmetry Space Group: C 2 2 21
R_factor 0.177 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.298 174.670 90.163 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACT, CL, PEG, PGE enzyme
related structures by homologous chain: 1RGX
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • hormone activity


  • Primary referenceDisulfide-dependent multimeric assembly of resistin family hormones., Patel SD, Rajala MW, Rossetti L, Scherer PE, Shapiro L, Science 2004 May 21;304(5674):1154-8. PMID:15155948
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1rfx.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (1rfx.pdb2.gz) 91 Kb
  • Biological Unit Coordinates (1rfx.pdb3.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 1RFX
  • CSU: Contacts of Structural Units for 1RFX
  • Likely Quarternary Molecular Structure file(s) for 1RFX
  • Structure Factors (178 Kb)
  • Retrieve 1RFX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RFX from S2C, [Save to disk]
  • Re-refined 1rfx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RFX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RFX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RFX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rfxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1rfxb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1rfxc_, region C [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rfx_C] [1rfx_B] [1rfx_A] [1rfx]
  • SWISS-PROT database: [Q99P87]
  • Domain organization of [RETN_MOUSE] by SWISSPFAM
  • Other resources with information on 1RFX
  • Community annotation for 1RFX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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