1RLD	Lyase(Carbon-Carbon)	date	Dec 10, 1993
title	Solid-State Phase Transition In The Crystal Structure Of Rib Biphosphate Carboxylase(Slash)Oxygenase
authors	K.Y.J.Zhang, D.Eisenberg
compound		source
Molecule: Ribulose 1,5 Bisphosphate Carboxylaseoxygenase ( Chain); Chain: A, B Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Nicotiana Tabacum Organism_common: Common Tobacco Organism_taxid: 4097
Molecule: Ribulose 1,5 Bisphosphate Carboxylaseoxygenase ( Chain); Chain: S, T Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Nicotiana Tabacum Organism_common: Common Tobacco Organism_taxid: 4097
symmetry	Space Group: I 4	R_factor 0.211 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 153.010 153.010 113.450 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand		enzyme	Lyase E.C.4.1.1.39 BRENDA
related structures	by homologous chain: 1EJ7, 1RLC
Gene Ontology	Chain Function Process Component A, B
Primary reference	Solid-state phase transition in the crystal structure of ribulose 1,5-bisphosphate carboxylase/oxygenase., Zhang KY, Eisenberg D, Acta Crystallogr D Biol Crystallogr. 1994 May 1;50(Pt 3):258-62. PMID:15299436

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk] Biological Unit Coordinates (1rld.pdb1.gz) 710 Kb CSU: Contacts of Structural Units for 1RLD Likely Quarternary Molecular Structure file(s) for 1RLD Structure Factors (295 Kb) Retrieve 1RLD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RLD from S2C, [Save to disk] Re-refined 1rld structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RLD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RLD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RLD, from MSDmotif at EBI Genome occurence of 1RLD's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rlda1, region A:148-467 [Jmol] [rasmolscript] [script source]     - Domain d1rlda2, region A:22-147 [Jmol] [rasmolscript] [script source]     - Domain d1rldb1, region B:148-467 [Jmol] [rasmolscript] [script source]     - Domain d1rldb2, region B:22-147 [Jmol] [rasmolscript] [script source]     - Domain d1rlds_, region S [Jmol] [rasmolscript] [script source]     - Domain d1rldt_, region T [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rld_A] [1rld_B] [1rld_T] [1rld_S] [1rld] SWISS-PROT database: [P00876] [P69249] Domain organization of [RBL_TOBAC] [RBS_TOBAC] by SWISSPFAM Domain found in 1RLD: [RuBisCO_small ] by SMART

Other resources with information on 1RLD

Community annotation for 1RLD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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