1ROQ Rna date Dec 02, 2003
title Extending The Family Of Uncg-Like Tetraloop Motifs: Nmr Stru Cacg Tetraloop From Coxsackievirus B3
authors Z.Du, J.Yu, R.Andino, T.L.James
compound source
Molecule: 5'-R(Gpgpupapupcpapcpgpgpupapcpc)-3
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Rna Was Prepared By In Vitro Transcription W Rna Polymerase, This Sequence Occurs Naturally In Coxsackie
methodSolution NMR
Primary referenceExtending the family of UNCG-like tetraloop motifs: NMR structure of a CACG tetraloop from coxsackievirus B3., Du Z, Yu J, Andino R, James TL, Biochemistry 2003 Apr 22;42(15):4373-83. PMID:12693932
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1roq.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 1ROQ
  • Retrieve 1ROQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ROQ from S2C, [Save to disk]
    • View 1ROQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ROQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ROQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1roq] [1roq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1ROQ
  • Community annotation for 1ROQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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