1RP0	Biosynthetic Protein	date	Dec 02, 2003
title	Crystal Structure Of Thi1 Protein From Arabidopsis Thaliana
authors	P.H.C.Godoi, M.A.Van Sluys, C.F.M.Menck, G.Oliva
compound		source
Molecule: Thiazole Biosynthetic Enzyme Chain: A, B Synonym: Ara6 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Thale Cress Organism_taxid: 3702 Gene: Thi1, Thi4, At5g54770, Mbg8.3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: F 2 2 2	R_factor 0.139 R_Free 0.171
crystal cell	length a length b length c angle alpha angle beta angle gamma 102.356 133.147 142.301 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	AHZ, HTO, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of the thiazole biosynthetic enzyme THI1 from Arabidopsis thaliana., Godoi PH, Galhardo RS, Luche DD, Van Sluys MA, Menck CF, Oliva G, J Biol Chem. 2006 Oct 13;281(41):30957-66. Epub 2006 Aug 15. PMID:16912043

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (1rp0.pdb1.gz) 364 Kb LPC: Ligand-Protein Contacts for 1RP0 CSU: Contacts of Structural Units for 1RP0 Likely Quarternary Molecular Structure file(s) for 1RP0 Structure Factors (506 Kb) Retrieve 1RP0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RP0 from S2C, [Save to disk] Re-refined 1rp0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RP0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RP0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RP0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rp0_B] [1rp0] [1rp0_A] SWISS-PROT database: [Q38814] Domain organization of [THI4_ARATH] by SWISSPFAM

Other resources with information on 1RP0

Community annotation for 1RP0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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