1RQS	Ribosome	date	Dec 07, 2003
title	Nmr Structure Of C-Terminal Domain Of Ribosomal Protein L7 F
authors	E.V.Bocharov, A.G.Sobol, K.V.Pavlov, D.M.Korzhnev, V.A.Jaravine, A.T.Gudkov, A.S.Arseniev
compound		source
Molecule: 50s Ribosomal Protein L7l12 Chain: A Fragment: C-Terminal Domain Synonym: L8 Engineered: Yes		Organism_scientific: Escherichia Coli, Escherichia Coli O6, Escherichia Coli O157: H7, Shigella Flexneri Organism_common: , , , Organism_taxid: 562,217992,83334,623 Strain: , O6, O157:H7, Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Xl1 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppr1
method	Solution NMR
related structures	by homologous chain: 1RQU
Gene Ontology	Chain Function Process Component A
Primary reference	From structure and dynamics of protein L7/L12 to molecular switching in ribosome., Bocharov EV, Sobol AG, Pavlov KV, Korzhnev DM, Jaravine VA, Gudkov AT, Arseniev AS, J Biol Chem 2004 Feb 11;. PMID:14960595

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk] Biological Unit Coordinates (1rqs.pdb1.gz) 18 Kb CSU: Contacts of Structural Units for 1RQS Original NMR restraints for 1RQS from PDB Retrieve 1RQS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RQS from S2C, [Save to disk]

View 1RQS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RQS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RQS, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rqsa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rqs] [1rqs_A] SWISS-PROT database: [P0A7K2] Domain organization of [RL7_ECOLI] by SWISSPFAM

Other resources with information on 1RQS

Community annotation for 1RQS at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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