1RUS Lyase(Carbon-Carbon) date Oct 10, 1991
title Crystal Structure Of The Binary Complex Of Ribulose-1,5-Bisp Carboxylase And Its Product, 3-Phospho-D-Glycerate
authors T.Lundqvist, G.Schneider
compound source
Molecule: Rubisco (Ribulose-1,5-Bisphosphate Carboxylase(Sl Oxygenase);
Chain: A, B
Ec: 4.1.1.39
Engineered: Yes
Organism_scientific: Rhodospirillum Rubrum
Organism_taxid: 1085
symmetry Space Group: P 1 21 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.500 70.600 104.100 90.00 92.10 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand 3PG enzyme Lyase E.C.4.1.1.39 BRENDA
related structures by homologous chain: 1RBA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the binary complex of ribulose-1,5-bisphosphate carboxylase and its product, 3-phospho-D-glycerate., Lundqvist T, Schneider G, J Biol Chem 1989 Mar 5;264(7):3643-6. PMID:2492987
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (1rus.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 1RUS
  • CSU: Contacts of Structural Units for 1RUS
  • Likely Quarternary Molecular Structure file(s) for 1RUS
  • Retrieve 1RUS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RUS from S2C, [Save to disk]
  • View 1RUS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RUS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RUS, from MSDmotif at EBI
  • Genome occurence of 1RUS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rusa1, region A:138-457 [Jmol] [rasmolscript] [script source]
        - Domain d1rusa2, region A:3-137 [Jmol] [rasmolscript] [script source]
        - Domain d1rusb1, region B:138-457 [Jmol] [rasmolscript] [script source]
        - Domain d1rusb2, region B:3-137 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rus] [1rus_A] [1rus_B]
  • SWISS-PROT database: [P04718]
  • Domain organization of [RBL2_RHORU] by SWISSPFAM
  • Other resources with information on 1RUS
  • Community annotation for 1RUS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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