1RZ2 Structural Genomics, Unknown Function date Dec 23, 2003
title 1.6a Crystal Structure Of The Protein Ba4783q81l49 (Similar Sortase B) From Bacillus Anthracis.
authors R.Wu, R.Zhang, P.Gornicki, A.Joachimiak, Midwest Center For Stru Genomics (Mcsg)
compound source
Molecule: Conserved Hypothetical Protein Ba4783
Chain: A
Engineered: Yes
Organism_scientific: Bacillus Anthracis
Organism_taxid: 198094
Strain: Str. Ames
Gene: Ba4783
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdm68
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.474 64.599 42.964 90.00 105.77 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of sortase B from Staphylococcus aureus and Bacillus anthracis reveal catalytic amino acid triad in the active site., Zhang R, Wu R, Joachimiak G, Mazmanian SK, Missiakas DM, Gornicki P, Schneewind O, Joachimiak A, Structure (Camb) 2004 Jul;12(7):1147-56. PMID:15242591
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1rz2.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1RZ2
  • Likely Quarternary Molecular Structure file(s) for 1RZ2
  • Structure Factors (529 Kb)
  • Retrieve 1RZ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RZ2 from S2C, [Save to disk]
  • Re-refined 1rz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RZ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RZ2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RZ2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rz2a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rz2] [1rz2_A]
  • SWISS-PROT database: [Q81L49]
  • Domain organization of [Q81L49_BACAN] by SWISSPFAM
  • Other resources with information on 1RZ2
  • Community annotation for 1RZ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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