1SAZ Transferase date Feb 09, 2004
title Membership In The Askha Superfamily: Enzymological Properties And Crystal Structure Of Butyrate Kinase 2 From Thermotoga Maritima
authors J.Diao, D.R.Cooper, D.A.Sanders, M.S.Hasson
compound source
Molecule: Probable Butyrate Kinase 2
Chain: A
Synonym: Bk 2, Branched-Chain Carboxylic Acid Kinase 2
Ec: 2.7.2.7
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Buk2, Tm1756
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834 Met- (De3)
Expression_system_vector_type: Pt7-7
Expression_system_plasmid: Pet30a(+)
symmetry Space Group: I 4 2 2
R_factor 0.217 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
197.685 197.685 58.238 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand ACP, FMT, MSE, NA enzyme Transferase E.C.2.7.2.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of butyrate kinase 2 from Thermotoga maritima, a member of the ASKHA superfamily of phosphotransferases., Diao J, Hasson MS, J Bacteriol. 2009 Apr;191(8):2521-9. Epub 2009 Feb 6. PMID:19201797
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1saz.pdb1.gz) 490 Kb
  • LPC: Ligand-Protein Contacts for 1SAZ
  • CSU: Contacts of Structural Units for 1SAZ
  • Likely Quarternary Molecular Structure file(s) for 1SAZ
  • Structure Factors (204 Kb)
  • Retrieve 1SAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SAZ from S2C, [Save to disk]
  • Re-refined 1saz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SAZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SAZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1saz] [1saz_A]
  • SWISS-PROT database: [Q9X278]
  • Domain organization of [BUK2_THEMA] by SWISSPFAM
  • Other resources with information on 1SAZ
  • Community annotation for 1SAZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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