1SHB	Phosphotransferase	date	Aug 18, 1992
title	Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides
authors	G.Waksman, J.Kuriyan
compound		source
Molecule: V-Src Sh2 Domain Chain: A Ec: 2.7.1.112 Engineered: Yes		Organism_scientific: Rous Sarcoma Virus Organism_taxid: 11886
Molecule: Phosphopeptide B Chain: B Engineered: Yes		Organism_scientific: Rous Sarcoma Virus Organism_taxid: 11886
symmetry	Space Group: P 41	R_factor 0.190 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.900 47.900 53.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	PTR BindingDB	enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1O46, 1O4E
Primary reference	Crystal structure of the phosphotyrosine recognition domain SH2 of v-src complexed with tyrosine-phosphorylated peptides., Waksman G, Kominos D, Robertson SC, Pant N, Baltimore D, Birge RB, Cowburn D, Hanafusa H, Mayer BJ, Overduin M, et al., Nature 1992 Aug 20;358(6388):646-53. PMID:1379696

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk] Biological Unit Coordinates (1shb.pdb1.gz) 19 Kb LPC: Ligand-Protein Contacts for 1SHB CSU: Contacts of Structural Units for 1SHB Likely Quarternary Molecular Structure file(s) for 1SHB Structure Factors (50 Kb) Retrieve 1SHB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1SHB from S2C, [Save to disk] Re-refined 1shb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1SHB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1SHB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1SHB, from MSDmotif at EBI Genome occurence of 1SHB's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1shba_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1shb] [1shb_B] [1shb_A] SWISS-PROT database: [P00524] Domain organization of [SRC_RSVSA] by SWISSPFAM Domain found in 1SHB: [SH2 ] by SMART

Other resources with information on 1SHB

Community annotation for 1SHB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---