1SZI Lipid Binding, Peptide Binding date Apr 05, 2004
title Crystal Structure Of The C-Terminus Of Tip47
authors S.J.Hickenbottom, A.R.Kimmel, C.Londos, J.H.Hurley
compound source
Molecule: Mannose-6-Phosphate Receptor Binding Protein 1
Chain: A
Fragment: C-Terminal Domain
Synonym: Tip47
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-De3codonplus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: His Parallel 2
symmetry Space Group: P 63 2 2
R_factor 0.236 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.746 118.746 97.291 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
Primary referenceStructure of a Lipid Droplet Protein; The PAT Family Member TIP47., Hickenbottom SJ, Kimmel AR, Londos C, Hurley JH, Structure (Camb) 2004 Jul;12(7):1199-207. PMID:15242596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1szi.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 1SZI
  • Likely Quarternary Molecular Structure file(s) for 1SZI
  • Retrieve 1SZI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SZI from S2C, [Save to disk]
  • View 1SZI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SZI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SZI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1szia_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1szi_A] [1szi]
  • SWISS-PROT database: [Q9DBG5]
  • Domain organization of [PLIN3_MOUSE] by SWISSPFAM
  • Other resources with information on 1SZI
  • Community annotation for 1SZI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science