1T43 Transferase date Apr 28, 2004
title Crystal Structure Analysis Of E.Coli Protein (N5)-Glutamine Methyltransferase (Hemk)
authors Z.Yang, L.Shipman, M.Zhang, B.P.Anton, R.J.Roberts, X.Cheng
compound source
Molecule: Protein Methyltransferase Hemk
Chain: A
Synonym: Protein-Glutamine N-Methyltransferase Hemk, Protei Glutamine-N5, Mtase Hemk, M.Ecokhemkp;
Ec: 2.1.1.-
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Hemk, B1212, Sf1215, S1299
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Er2566
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Paii17
symmetry Space Group: P 63
R_factor 0.289 R_Free 0.315
crystal
cell
length a length b length c angle alpha angle beta angle gamma
138.933 138.933 40.583 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.20 Å
ligand SAH enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural characterization and comparative phylogenetic analysis of Escherichia coli HemK, a protein (N5)-glutamine methyltransferase., Yang Z, Shipman L, Zhang M, Anton BP, Roberts RJ, Cheng X, J Mol Biol 2004 Jul 16;340(4):695-706. PMID:15223314
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (1t43.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 1T43
  • CSU: Contacts of Structural Units for 1T43
  • Likely Quarternary Molecular Structure file(s) for 1T43
  • Retrieve 1T43 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T43 from S2C, [Save to disk]
  • View 1T43 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1T43
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T43, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t43a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t43] [1t43_A]
  • SWISS-PROT database: [P0ACC1]
  • Domain organization of [HEMK_ECOLI] by SWISSPFAM
  • Other resources with information on 1T43
  • Community annotation for 1T43 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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