1T5H	Ligase	date	May 04, 2004
title	4-Chlorobenzoyl-Coa Ligasesynthetase Unliganded, Selenometh
authors	A.M.Gulick, X.Lu, D.Dunaway-Mariano
compound		source
Molecule: 4-Chlorobenzoyl Coa Ligase Chain: X Ec: 6.2.1.33 Engineered: Yes Mutation: Yes		Organism_scientific: Alcaligenes Sp. Al3007 Organism_taxid: 206162 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 Expression_system_vector_type: Plasid Expression_system_plasmid: Pqe70
symmetry	Space Group: P 32 2 1	R_factor 0.183 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 124.979 124.979 69.001 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CA, MSE	enzyme	Ligase E.C.6.2.1.33 BRENDA
related structures	by homologous chain: 1T5D
Gene Ontology	Chain Function Process Component X
Primary reference	Crystal structure of 4-chlorobenzoate:CoA ligase/synthetase in the unliganded and aryl substrate-bound states., Gulick AM, Lu X, Dunaway-Mariano D, Biochemistry 2004 Jul 13;43(27):8670-9. PMID:15236575

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (1t5h.pdb1.gz) 162 Kb LPC: Ligand-Protein Contacts for 1T5H CSU: Contacts of Structural Units for 1T5H Likely Quarternary Molecular Structure file(s) for 1T5H Structure Factors (314 Kb) Retrieve 1T5H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1T5H from S2C, [Save to disk] Re-refined 1t5h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1T5H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1T5H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1T5H, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1t5hx_, region X [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1t5h] [1t5h_X] SWISS-PROT database: [Q8GN86] Domain organization of [Q8GN86_9BURK] by SWISSPFAM

Other resources with information on 1T5H

Community annotation for 1T5H at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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