1T5P Oxidoreductase date May 05, 2004
title Human Heme Oxygenase Oxidation Of Alpha- And Gamma-Meso-Phen
authors J.Wang, F.Niemevz, L.Lad, G.Buldain, T.L.Poulos, P.R.Ortiz De Mon
compound source
Molecule: Heme Oxygenase 1
Chain: A, B
Synonym: Ho-1
Ec: 1.14.99.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hmox1, Ho1, Ho
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5alpha
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 1 21 1
R_factor 0.270 R_Free 0.310
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.914 64.425 60.467 90.00 90.02 90.00
method X-Ray Diffractionresolution 2.11 Å
ligand 1FH enzyme Oxidoreductase E.C.1.14.99.3 BRENDA
related structures by homologous chain: 1NI6, 1OZE
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHuman heme oxygenase oxidation of 5- and 15-phenylhemes., Wang J, Niemevz F, Lad L, Huang L, Alvarez DE, Buldain G, Poulos TL, Ortiz De Montellano PR, J Biol Chem 2004 Aug 5;. PMID:15297453
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1t5p.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (1t5p.pdb2.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 1T5P
  • CSU: Contacts of Structural Units for 1T5P
  • Likely Quarternary Molecular Structure file(s) for 1T5P
  • Retrieve 1T5P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T5P from S2C, [Save to disk]
  • View 1T5P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1T5P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T5P, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t5pa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1t5pb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t5p_B] [1t5p] [1t5p_A]
  • SWISS-PROT database: [P09601]
  • Domain organization of [HMOX1_HUMAN] by SWISSPFAM
  • Other resources with information on 1T5P
  • Community annotation for 1T5P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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