1T5X | Immune System | date | May 05, 2004 |
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title | Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr Superantigen Sec3-3b2 | ||||||||||||||||||
authors | Z.Zavala-Ruiz, I.Strug, M.W.Anderson, J.Gorski, L.J.Stern | ||||||||||||||||||
compound | source | ||||||||||||||||||
Molecule: Hla Class II Histocompatibility Antigen, Dr Alpha Chain: A Fragment: Extracellular Domain Synonym: Mhc Class II Antigen Dra Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hla-Dra0101 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: T7 Polymeraselac Expression_system_plasmid: Plm1 | ||||||||||||||||||
Molecule: Hla Class II Histocompatibility Antigen, Drb1-1 B Chain: B Fragment: Extracellular Domain Synonym: Mhc Class I Antigen Drb11, Dr-1, Dr1 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hla-Drb10101 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: T7 Polymerase Lac Expression_system_plasmid: Plm1 | ||||||||||||||||||
Molecule: 15-Mer Peptide Fragment Of Regulatory Protein Mig Chain: C Fragment: Synthetic Peptide Synonym: Regulatory Protein Cat4 Engineered: Yes |
Synthetic: Yes Other_details: Synthetic Peptide Desinged To Study The P10 Chain Specificity Of Hla-Dr1; | ||||||||||||||||||
Molecule: Enterotoxin Type C-3 Chain: D Fragment: Sec3 Variant 3b2 Synonym: Sec3; Enterotoxin Typec3 Engineered: Yes Mutation: Yes |
Organism_scientific: Staphylococcus Aureus Organism_taxid: 1280 Gene: Sec3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hb 2151 Expression_system_vector_type: Lac | ||||||||||||||||||
symmetry | Space Group: H 3 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.50 Å | ||||||||||||||||
related structures | by homologous chain: 1D5X, 1LNU, 1R5V, 2SEB | ||||||||||||||||||
Gene Ontology |
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Primary reference | A polymorphic pocket at the P10 position contributes to peptide binding specificity in class II MHC proteins., Zavala-Ruiz Z, Strug I, Anderson MW, Gorski J, Stern LJ, Chem Biol 2004 Oct;11(10):1395-402. PMID:15489166 |
Data retrieval |
View 1T5X in 3D |
Visual 3D analysis of 1T5X |
Structure-derived information |
- Domain d1t5xa2, region A:4-81 [Jmol] [rasmolscript] [script source] - Domain d1t5xa1, region A:82-181 [Jmol] [rasmolscript] [script source] - Domain d1t5xb2, region B:1-92 [Jmol] [rasmolscript] [script source] - Domain d1t5xb1, region B:93-190 [Jmol] [rasmolscript] [script source] - Domain d1t5xd1, region D:1-121 [Jmol] [rasmolscript] [script source] - Domain d1t5xd2, region D:122-239 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |