1T8K Lipid Transport date May 13, 2004
title Crystal Structure Of Apo Acyl Carrier Protein From E. Coli
authors X.Qiu, C.A.Janson
compound source
Molecule: Acyl Carrier Protein
Chain: A
Synonym: Acp, Cytosolic Activating Factor, Caf, Fatty Acid Acyl Carrier Protein;
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.133 R_Free 0.150
crystal
cell
length a length b length c angle alpha angle beta angle gamma
27.510 41.260 62.480 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.10 Å
ligand IMD, ZN enzyme
note 1T8K is a representative structure
related structures by homologous chain: 1L0I
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of apo acyl carrier protein and a proposal to engineer protein crystallization through metal ions., Qiu X, Janson CA, Acta Crystallogr D Biol Crystallogr 2004 Sep;60(Pt 9):1545-54. Epub 2004, Aug 26. PMID:15333924
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1t8k.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1T8K
  • CSU: Contacts of Structural Units for 1T8K
  • Likely Quarternary Molecular Structure file(s) for 1T8K
  • Retrieve 1T8K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T8K from S2C, [Save to disk]
    • View 1T8K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1T8K
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1T8K from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T8K, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t8ka_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t8k_A] [1t8k]
  • SWISS-PROT database: [P0A6A8]
  • Domain organization of [ACP_ECOLI] by SWISSPFAM
    • Other resources with information on 1T8K
  • Community annotation for 1T8K at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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