1T95 Unknown Function date May 14, 2004
title Crystal Structure Of The Shwachman-Bodian-Diamond Syndrome Protein Orthologue From Archaeoglobus Fulgidus
authors C.Shammas, A.J.Warren
compound source
Molecule: Hypothetical Protein Af0491
Chain: A
Engineered: Yes
 Organism_scientific: Archaeoglobus Fulgidus
Organism_taxid: 2234
Gene: Af0491
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prset
symmetry Space Group: P 1
R_factor 0.212 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.668 44.448 54.720 75.87 85.61 69.49
method X-Ray Diffractionresolution 1.90 Å
ligand MSE enzyme
related structures by homologous chain: 1P9Q
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Mutational Analysis of the SBDS Protein Family: INSIGHT INTO THE LEUKEMIA-ASSOCIATED SHWACHMAN-DIAMOND SYNDROME., Shammas C, Menne TF, Hilcenko C, Michell SR, Goyenechea B, Boocock GR, Durie PR, Rommens JM, Warren AJ, J Biol Chem 2005 May 13;280(19):19221-9. Epub 2005 Feb 8. PMID:15701631
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1t95.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 1T95
  • CSU: Contacts of Structural Units for 1T95
  • Likely Quarternary Molecular Structure file(s) for 1T95
  • Structure Factors (852 Kb)
  • Retrieve 1T95 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T95 from S2C, [Save to disk]
  • Re-refined 1t95 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1T95 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1T95
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T95, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t95a2, region A:11-86 [Jmol] [rasmolscript] [script source]
        - Domain d1t95a3, region A:162-234 [Jmol] [rasmolscript] [script source]
        - Domain d1t95a1, region A:87-161 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t95] [1t95_A]
  • SWISS-PROT database: [O29759]
  • Domain organization of [SDO1_ARCFU] by SWISSPFAM
    • Other resources with information on 1T95
  • Community annotation for 1T95 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science