1TGB Hydrolase Zymogen (Serine Proteinase) date Mar 07, 1979
title Crystal Structure Of Bovine Trypsinogen At 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure And Comparison With Bovine Trypsin
authors W.Bode, H.Fehlhammer, R.Huber
compound source
Molecule: Trypsinogen
Chain: A
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 31 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.100 55.100 109.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand CA enzyme
related structures by homologous chain: 1V2V, 1ZR0
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of bovine trypsinogen at 1-8 A resolution. II. Crystallographic refinement, refined crystal structure and comparison with bovine trypsin., Fehlhammer H, Bode W, Huber R, J Mol Biol 1977 Apr 25;111(4):415-38. PMID:864704
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1tgb.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 1TGB
  • CSU: Contacts of Structural Units for 1TGB
  • Likely Quarternary Molecular Structure file(s) for 1TGB
  • Retrieve 1TGB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TGB from S2C, [Save to disk]
  • View 1TGB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TGB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TGB, from MSDmotif at EBI
  • Genome occurence of 1TGB's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tgb__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tgb] [1tgb_A]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 1TGB: [Tryp_SPc ] by SMART
  • Other resources with information on 1TGB
  • Community annotation for 1TGB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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