1TK8 | Transferase Electron Transport Dna | date | Jun 08, 2004 |
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title | T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And D Elongation Site | ||||||||||||||
authors | L.G.Brieba, B.F.Eichman, R.J.Kokoska, S.Doublie, T.A.Kunkel, T.El | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 5'-D(Cpgpapapapapcpgpapcpgpgpcpcpa Cpcpap(2da))-3'; Chain: P Engineered: Yes Other_details: Primer Strand |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(Cpcpcpap(8og) Ptpgpgpcpapcptpgpgpcpcpgptpcpgptptptptp Chain: T Engineered: Yes Other_details: Template Strand |
Synthetic: Yes | ||||||||||||||
Molecule: Dna Polymerase Chain: A Synonym: T7 Dna Polymerase Ec: 2.7.7.7 Engineered: Yes |
Organism_scientific: Enterobacteria Phage T7 Organism_taxid: 10760 Gene: 5 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_plasmid: Pgp5 | ||||||||||||||
Molecule: Thioredoxin 1 Chain: B Synonym: Trx1, Trx Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Trxa, Tsnc, Fipa, B3781, C4701, Z5291, Ecs4714, Stm39 Stmd1.75, Sty3639, T3381, Sf3854, S3905; Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_plasmid: Ptrx-3 | ||||||||||||||
symmetry | Space Group: P 21 21 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.50 Å | ||||||||||||
ligand | 1PE, 2DA, 8OG, D3T, MES, MG, SO4 | enzyme | Transferase E.C.2.7.7.7 BRENDA | ||||||||||||
related structures | by homologous chain: 1T8E, 1TKD | ||||||||||||||
Gene Ontology |
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Primary reference | Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase., Brieba LG, Eichman BF, Kokoska RJ, Doublie S, Kunkel TA, Ellenberger T, EMBO J 2004 Sep 1;23(17):3452-61. Epub 2004 Aug 5. PMID:15297882 |
Data retrieval |
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Visual 3D analysis of 1TK8 |
Structure-derived information |
- Domain d1tk8a1, region A:1-210 [Jmol] [rasmolscript] [script source] - Domain d1tk8a2, region A:211-704 [Jmol] [rasmolscript] [script source] - Domain d1tk8b_, region B [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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