1TOW Lipid Transport date Jun 15, 2004
title Crystal Structure Of Human Adipocyte Fatty Acid Binding Prot Complex With A Carboxylic Acid Ligand
authors F.Lehmann, S.Haile, E.Axen, C.Medina, J.Uppenberg, S.Svensson, T.L L.Rondahl, T.Barf
compound source
Molecule: Fatty Acid-Binding Protein, Adipocyte
Chain: A
Synonym: Afabp, Adipocyte Lipid-Binding Protein, Albp, A-Fa
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.188 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.050 53.045 31.782 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CRZ BindingDB enzyme
related structures by homologous chain: 1AB0, 1TOU
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of inhibitors of human adipocyte fatty acid-binding protein, a potential type 2 diabetes target., Lehmann F, Haile S, Axen E, Medina C, Uppenberg J, Svensson S, Lundback T, Rondahl L, Barf T, Bioorg Med Chem Lett. 2004 Sep 6;14(17):4445-8. PMID:15357969
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (1tow.pdb1.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 1TOW
  • CSU: Contacts of Structural Units for 1TOW
  • Likely Quarternary Molecular Structure file(s) for 1TOW
  • Structure Factors (70 Kb)
  • Retrieve 1TOW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TOW from S2C, [Save to disk]
  • Re-refined 1tow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TOW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TOW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TOW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1towa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tow_A] [1tow]
  • SWISS-PROT database: [P15090]
  • Domain organization of [FABP4_HUMAN] by SWISSPFAM
  • Other resources with information on 1TOW
  • Community annotation for 1TOW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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