1TPY Transferase date Jun 16, 2004
title Structure Of The Cyclopropane Synthase Mmaa2 From Mycobacter Tuberculosis
authors C.V.Smith, J.C.Sacchettini
compound source
Molecule: Methoxy Mycolic Acid Synthase 2
Chain: A
Ec: 2.1.1.79
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Mmaa2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30b-Mmaa2
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.587 58.420 133.683 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 16A, CO3, SAH enzyme Transferase E.C.2.1.1.79 BRENDA
related structures by homologous chain: 1KP9, 1L1E
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1tpy.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 1TPY
  • CSU: Contacts of Structural Units for 1TPY
  • Likely Quarternary Molecular Structure file(s) for 1TPY
  • Retrieve 1TPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TPY from S2C, [Save to disk]
  • View 1TPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TPY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TPY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tpya_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tpy_A] [1tpy]
  • SWISS-PROT database: [Q79FX6]
  • Domain organization of [Q79FX6_MYCTU] by SWISSPFAM
  • Other resources with information on 1TPY
  • Community annotation for 1TPY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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