1TRH Hydrolase(Carboxylic Esterase) date Nov 18, 1993
title Two Conformational States Of Candida Rugosa Lipase
authors P.Grochulski, M.Cygler
compound source
Molecule: Lipase
Chain: A
Ec: 3.1.1.3
Engineered: Yes
Organism_scientific: Candida Rugosa
Organism_taxid: 5481
symmetry Space Group: C 1 2 1
R_factor 0.148 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.000 106.700 59.800 90.00 94.80 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand NAG enzyme Hydrolase E.C.3.1.1.3 BRENDA
related structures by homologous chain: 1CRL, 1LPS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTwo conformational states of Candida rugosa lipase., Grochulski P, Li Y, Schrag JD, Cygler M, Protein Sci 1994 Jan;3(1):82-91. PMID:8142901
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (1trh.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 1TRH
  • CSU: Contacts of Structural Units for 1TRH
  • Likely Quarternary Molecular Structure file(s) for 1TRH
  • Retrieve 1TRH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TRH from S2C, [Save to disk]
  • View 1TRH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TRH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TRH, from MSDmotif at EBI
  • Genome occurence of 1TRH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1trh__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1trh_A] [1trh]
  • SWISS-PROT database: [P20261]
  • Domain organization of [LIP1_CANRU] by SWISSPFAM
  • Other resources with information on 1TRH
  • Community annotation for 1TRH at PDBWiki (http://pdbwiki.org)
  • LED, table of lipase structures from Lipase Engineering Database.
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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