1TUC Cytoskeleton date Feb 29, 1996
title Alpha-Spectrin Src Homology 3 Domain, Circular Permutant, Cu P20
authors M.Wilmanns, L.Serrano, A.R.Viguera
compound source
Molecule: Alpha-Spectrin
Chain: A
Fragment: Src Homology 3 Domain
Engineered: Yes
Mutation: Yes
Other_details: This Is A Circular Permutant Of The Wt Alpha
Sh3 Sequence (Pdb Entry Wt-3d Structure: 1sgb). The Residue Are As In The Wt Spectrin-Sh3 Domain (1sgb). Thr 4 (N-Termi Asp 62 (C-Terminus) Of The Wt-Sh3 Sequence Are Linked By Tw Additional Residues (Ser 2, Gly 3). The Chain Is Cleaved Be 19 And Pro 20. Two Residues Are Added At The New N-Terminus Gly 101).
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Brain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet3d
symmetry Space Group: P 43 21 2
R_factor 0.214 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.800 41.800 92.040 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.02 Å
related structures by homologous chain: 1PWT, 1SHG
Primary referenceThe order of secondary structure elements does not determine the structure of a protein but does affect its folding kinetics., Viguera AR, Blanco FJ, Serrano L, J Mol Biol 1995 Apr 7;247(4):670-81. PMID:7723022
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (1tuc.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1TUC
  • Likely Quarternary Molecular Structure file(s) for 1TUC
  • Retrieve 1TUC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TUC from S2C, [Save to disk]
  • View 1TUC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TUC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TUC, from MSDmotif at EBI
  • Genome occurence of 1TUC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tuc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tuc_A] [1tuc]
  • SWISS-PROT database: [P07751]
  • Domain organization of [SPTA2_CHICK] by SWISSPFAM
  • Domain found in 1TUC: [SH3 ] by SMART
  • Other resources with information on 1TUC
  • Community annotation for 1TUC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science