1TVP Hydrolase date Jun 30, 2004
title Endoglucanase Cel5g From Pseudoalteromonas Haloplanktis In C With Cellobiose
authors S.Violot, R.Haser, N.Aghajari
compound source
Molecule: Cellulase
Chain: A, B
Fragment: Catalytic Domain
Synonym: Endoglucanase G
Ec: 3.2.1.4
Engineered: Yes
Organism_scientific: Pseudoalteromonas Haloplanktis
Organism_taxid: 228
Gene: Celg
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Epicurian Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 21 21 21
R_factor 0.158 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.500 78.900 44.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand BGC, EPE enzyme Hydrolase E.C.3.2.1.4 BRENDA
related structures by homologous chain: 1EGZ, 1TVN
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of a Full Length Psychrophilic Cellulase from Pseudoalteromonas haloplanktis revealed by X-ray Diffraction and Small Angle X-ray Scattering., Violot S, Aghajari N, Czjzek M, Feller G, Sonan GK, Gouet P, Gerday C, Haser R, Receveur-Brechot V, J Mol Biol 2005 May 20;348(5):1211-24. Epub 2005 Mar 25. PMID:15854656
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (1tvp.pdb1.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 1TVP
  • CSU: Contacts of Structural Units for 1TVP
  • Likely Quarternary Molecular Structure file(s) for 1TVP
  • Structure Factors (448 Kb)
  • Retrieve 1TVP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TVP from S2C, [Save to disk]
  • Re-refined 1tvp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TVP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TVP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TVP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tvp_B] [1tvp_A] [1tvp]
  • SWISS-PROT database: [O86099]
  • Domain organization of [O86099_PSEHA] by SWISSPFAM
  • Other resources with information on 1TVP
  • Community annotation for 1TVP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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