1TW9 Transferase date Jun 30, 2004
title Glutathione Transferase-2, Apo Form, From The Nematode Helig Polygyrus
authors D.J.Schuller, Q.Liu, I.A.Kriksunov, A.M.Campbell, J.Barrett, P.M. Q.Hao
compound source
Molecule: Glutathione S-Transferase 2
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
Organism_scientific: Heligmosomoides Polygyrus
Organism_taxid: 6339
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23d
symmetry Space Group: P 1
R_factor 0.180 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.678 74.034 88.573 79.09 80.08 81.55
method X-Ray Diffractionresolution 1.71 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceCrystal structure of a new class of glutathione transferase from the model human hookworm nematode Heligmosomoides polygyrus., Schuller DJ, Liu Q, Kriksunov IA, Campbell AM, Barrett J, Brophy PM, Hao Q, Proteins. 2005 Dec 1;61(4):1024-31. PMID:16189827
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (288 Kb) [Save to disk]
  • Biological Unit Coordinates (1tw9.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (1tw9.pdb2.gz) 72 Kb
  • Biological Unit Coordinates (1tw9.pdb3.gz) 70 Kb
  • Biological Unit Coordinates (1tw9.pdb4.gz) 68 Kb
  • CSU: Contacts of Structural Units for 1TW9
  • Likely Quarternary Molecular Structure file(s) for 1TW9
  • Structure Factors (1357 Kb)
  • Retrieve 1TW9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TW9 from S2C, [Save to disk]
  • Re-refined 1tw9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TW9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TW9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TW9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tw9a2, region A:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9a1, region A:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9b2, region B:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9b1, region B:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9c2, region C:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9c1, region C:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9d2, region D:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9d1, region D:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9e2, region E:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9e1, region E:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9f2, region F:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9f1, region F:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9g2, region G:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9g1, region G:78-206 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9h2, region H:1-77 [Jmol] [rasmolscript] [script source]
        - Domain d1tw9h1, region H:78-206 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tw9_F] [1tw9_C] [1tw9] [1tw9_E] [1tw9_B] [1tw9_G] [1tw9_H] [1tw9_D] [1tw9_A]
  • SWISS-PROT database: [Q9NJQ6]
  • Domain organization of [Q9NJQ6_9BILA] by SWISSPFAM
  • Other resources with information on 1TW9
  • Community annotation for 1TW9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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