1TYU STRUCTURE OF TAILSPIKE-PROTEIN date
authors Steinbacher, S., Huber, R.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand GLA, MAN, RAM, TYV enzyme
related structures by homologous chain: 1QQ1, 1TYX
Primary referenceCrystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors., Steinbacher S, Baxa U, Miller S, Weintraub A, Seckler R, Huber R, Proc Natl Acad Sci U S A 1996 Oct 1;93(20):10584-8. PMID:8855221
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (1tyu.pdb1.gz) 256 Kb
  • LPC: Ligand-Protein Contacts for 1TYU
  • CSU: Contacts of Structural Units for 1TYU
  • Likely Quarternary Molecular Structure file(s) for 1TYU
  • Retrieve 1TYU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TYU from S2C, [Save to disk]
  • View 1TYU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TYU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TYU, from MSDmotif at EBI
  • Genome occurence of 1TYU's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tyu__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tyu_A] [1tyu]
  • SWISS-PROT database: [P12528]
  • Domain organization of [TSPE_BPP22] by SWISSPFAM
  • Domain found in 1TYU: [PbH1 ] by SMART
  • Other resources with information on 1TYU
  • Community annotation for 1TYU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science