1U1T Rna Binding Protein date Jul 16, 2004
title Hfq Protein From Pseudomonas Aeruginosa. High-Salt Crystals
authors A.D.Nikulin, E.A.Stolboushkina, A.A.Perederina, I.M.Vassilieva, I.Moll, G.Kachalova, S.Yokoyama, D.Vassylyev, M.Garber, S.V.Niko Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Hfq Protein
Chain: A, B, C, D, E, F
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Hfq
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b(+)
symmetry Space Group: P 21 21 21
R_factor 0.205 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.440 72.350 109.250 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
related structures by homologous chain: 1HK9, 1U1S
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructure of Pseudomonas aeruginosa Hfq protein., Nikulin A, Stolboushkina E, Perederina A, Vassilieva I, Blaesi U, Moll I, Kachalova G, Yokoyama S, Vassylyev D, Garber M, Nikonov S, Acta Crystallogr D Biol Crystallogr. 2005 Feb;61(Pt 2):141-6. Epub 2005, Jan 19. PMID:15681864
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (1u1t.pdb1.gz) 67 Kb
  • CSU: Contacts of Structural Units for 1U1T
  • Likely Quarternary Molecular Structure file(s) for 1U1T
  • Structure Factors (519 Kb)
  • Retrieve 1U1T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U1T from S2C, [Save to disk]
  • Re-refined 1u1t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U1T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U1T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U1T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u1t_A] [1u1t_E] [1u1t_F] [1u1t_D] [1u1t_B] [1u1t_C] [1u1t]
  • SWISS-PROT database: [Q9HUM0]
  • Domain organization of [HFQ_PSEAE] by SWISSPFAM
  • Other resources with information on 1U1T
  • Community annotation for 1U1T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science