1U2P Hydrolase date Jul 20, 2004
title Crystal Structure Of Mycobacterium Tuberculosis Low Molecula Tyrosine Phosphatase (Mptpa) At 1.9a Resolution
authors C.Madhurantakam, E.Rajakumara, P.A.Mazumdar, B.Saha, D.Mitra, H.G R.Sankaranarayanan, A.K.Das
compound source
Molecule: Low Molecular Weight Protein-Tyrosine-Phosphatase
Chain: A
Synonym: Ptpase
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Mptpa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Sg13009
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.816 53.610 68.486 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CL enzyme Hydrolase E.C.3.1.3.48 BRENDA
related structures by homologous chain: 1U2Q
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein tyrosine phosphatase...


  • Primary referenceCrystal structure of low-molecular-weight protein tyrosine phosphatase from Mycobacterium tuberculosis at 1.9-A resolution., Madhurantakam C, Rajakumara E, Mazumdar PA, Saha B, Mitra D, Wiker HG, Sankaranarayanan R, Das AK, J Bacteriol 2005 Mar;187(6):2175-81. PMID:15743966
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1u2p.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 1U2P
  • CSU: Contacts of Structural Units for 1U2P
  • Likely Quarternary Molecular Structure file(s) for 1U2P
  • Structure Factors (102 Kb)
  • Retrieve 1U2P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U2P from S2C, [Save to disk]
  • Re-refined 1u2p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U2P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U2P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U2P, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u2p_A] [1u2p]
  • SWISS-PROT database: [P65716]
  • Domain organization of [PTPA_MYCTU] by SWISSPFAM
  • Domain found in 1U2P: [LMWPc ] by SMART
  • Other resources with information on 1U2P
  • Community annotation for 1U2P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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