1U4D	Transferase	date	Jul 23, 2004
title	Structure Of The Ack1 Kinase Domain Bound To Debromohymenial
authors	J.C.Lougheed, R.H.Chen, P.Mak, T.J.Stout
compound		source
Molecule: Activated Cdc42 Kinase 1 Chain: A, B Fragment: Kinase Domain Synonym: Ack-1 Ec: 2.7.1.112 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ack1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_strain: Sf-9 Expression_system_vector_type: Baculovirus Expression_system_vector: Pacgp67
symmetry	Space Group: P 1 21 1	R_factor 0.203 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.552 42.918 85.149 90.00 112.02 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	CL, DBQ	enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1U46, 1U54
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structures of the phosphorylated and unphosphorylated kinase domains of the Cdc42-associated tyrosine kinase ACK1., Lougheed JC, Chen RH, Mak P, Stout TJ, J Biol Chem 2004 Aug 11;. PMID:15308621

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk] Biological Unit Coordinates (1u4d.pdb1.gz) 44 Kb Biological Unit Coordinates (1u4d.pdb2.gz) 45 Kb LPC: Ligand-Protein Contacts for 1U4D CSU: Contacts of Structural Units for 1U4D Likely Quarternary Molecular Structure file(s) for 1U4D Structure Factors (479 Kb) Retrieve 1U4D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U4D from S2C, [Save to disk] Re-refined 1u4d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1U4D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1U4D

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U4D, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1u4da_, region A [Jmol] [rasmolscript] [script source]     - Domain d1u4db_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u4d] [1u4d_B] [1u4d_A] SWISS-PROT database: [Q07912] Domain organization of [ACK1_HUMAN] by SWISSPFAM Domain found in 1U4D: [TyrKc ] by SMART

Other resources with information on 1U4D

Community annotation for 1U4D at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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