1U5H Lyase date Jul 27, 2004
title Structure Of Citrate Lyase Beta Subunit From Mycobacterium Tuberculosis
authors C.W.Goulding, T.Lekin, C.Y.Kim, B.Segelke, T.C.Terwilliger, D.Eis Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Cite
Chain: A
Synonym: Citrate Lyase Beta Subunit
Ec: 4.1.3.6
Engineered: Yes
Mutation: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Rv2498c
Expression_system: Escherichia Coli K12
Expression_system_taxid: 83333
Expression_system_strain: K12
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: H 3 2
R_factor 0.268 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.214 91.214 221.233 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.65 Å
ligand FMT enzyme Lyase E.C.4.1.3.6 BRENDA
related structures by homologous chain: 1U5V
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure and computational analysis of Mycobacterium tuberculosis protein CitE suggest a novel enzymatic function., Goulding CW, Bowers PM, Segelke B, Lekin T, Kim CY, Terwilliger TC, Eisenberg D, J Mol Biol. 2007 Jan 12;365(2):275-83. Epub 2006 Oct 3. PMID:17064730
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1u5h.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 1U5H
  • CSU: Contacts of Structural Units for 1U5H
  • Likely Quarternary Molecular Structure file(s) for 1U5H
  • Structure Factors (462 Kb)
  • Retrieve 1U5H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U5H from S2C, [Save to disk]
  • Re-refined 1u5h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U5H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U5H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U5H, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u5ha_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u5h] [1u5h_A] [1u5h_]
  • SWISS-PROT database: [O06162]
  • Domain organization of [CITEL_MYCTU] by SWISSPFAM
  • Other resources with information on 1U5H
  • Community annotation for 1U5H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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