1U5J	Transferase	date	Jul 27, 2004
title	Propionibacterium Shermanii Transcarboxylase 5s Subunit, Met
authors	P.R.Hall, R.Zheng, L.Antony, M.Pusztai-Carey, P.R.Carey, V.C.Yee
compound		source
Molecule: Transcarboxylase 5s Subunit Chain: A Ec: 2.1.3.1 Engineered: Yes Mutation: Yes		Organism_scientific: Propionibacterium Freudenreichii Subsp Shermanii; Organism_taxid: 1752 Strain: Subsp. Shermanii Gene: 5s Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tuner(De3)Placi Expression_system_vector_type: Plasmid Expression_system_plasmid: Petblue-2
symmetry	Space Group: C 2 2 21	R_factor 0.207 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.680 147.042 78.812 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	CO, KCX	enzyme	Transferase E.C.2.1.3.1 BRENDA
related structures	by homologous chain: 1S3H
Gene Ontology	Chain Function Process Component A
Primary reference	Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit., Hall PR, Zheng R, Antony L, Pusztai-Carey M, Carey PR, Yee VC, EMBO J 2004 Aug 26;. PMID:15329673

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk] Biological Unit Coordinates (1u5j.pdb1.gz) 146 Kb LPC: Ligand-Protein Contacts for 1U5J CSU: Contacts of Structural Units for 1U5J Likely Quarternary Molecular Structure file(s) for 1U5J Structure Factors (197 Kb) Retrieve 1U5J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U5J from S2C, [Save to disk] Re-refined 1u5j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1U5J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1U5J

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U5J, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1u5ja1, region A:307-474 [Jmol] [rasmolscript] [script source]     - Domain d1u5ja2, region A:4-306 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u5j] [1u5j_A] SWISS-PROT database: [Q70AC7] Domain organization of [5S_PROFR] by SWISSPFAM

Other resources with information on 1U5J

Community annotation for 1U5J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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