1U61 Structural Genomics, Unknown Function date Jul 29, 2004
title Crystal Structure Of Putative Ribonuclease III From Bacillus
authors J.Osipiuk, P.Quartey, S.Moy, F.Collart, A.Joachimiak, Midwest Cen Structural Genomics (Mcsg)
compound source
Molecule: Hypothetical Protein
Chain: A
Engineered: Yes
Organism_scientific: Bacillus Cereus
Organism_taxid: 1396
Atcc: 14579
Gene: Bc0111
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: I 41 3 2
R_factor 0.204 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.978 168.978 168.978 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity
  • ribonuclease III activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (1u61.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1U61
  • CSU: Contacts of Structural Units for 1U61
  • Likely Quarternary Molecular Structure file(s) for 1U61
  • Structure Factors (194 Kb)
  • Retrieve 1U61 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U61 from S2C, [Save to disk]
  • Re-refined 1u61 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U61 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U61
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U61, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u61a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u61] [1u61_A]
  • SWISS-PROT database: [Q81J58]
  • Domain organization of [Q81J58_BACCR] by SWISSPFAM
  • Domain found in 1U61: [RIBOc ] by SMART
  • Other resources with information on 1U61
  • Community annotation for 1U61 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science