1U7U Ligase date Aug 04, 2004
title Phosphopantothenoylcysteine Synthetase From E. Coli
authors S.Stanitzek, M.A.Augustin, R.Huber, T.Kupke, S.Steinbacher
compound source
Molecule: Coenzyme A Biosynthesis Bifunctional Protein Coab
Chain: A
Fragment: Phosphopantothenoylcysteine Synthetase(Residues 1
Ec: 6.3.2.5
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.221 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.930 57.255 78.756 90.00 108.86 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand
enzyme Ligase E.C.6.3.2.5 BRENDA
related structures by homologous chain: 1U7W, 1U7Z
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis of CTP-Dependent Peptide Bond Formation in Coenzyme A Biosynthesis Catalyzed by Escherichia coli PPC Synthetase., Stanitzek S, Augustin MA, Huber R, Kupke T, Steinbacher S, Structure (Camb) 2004 Nov;12(11):1977-88. PMID:15530362
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1u7u.pdb1.gz) 65 Kb
  • CSU: Contacts of Structural Units for 1U7U
  • Likely Quarternary Molecular Structure file(s) for 1U7U
  • Structure Factors (67 Kb)
  • Retrieve 1U7U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U7U from S2C, [Save to disk]
  • Re-refined 1u7u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U7U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U7U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U7U, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u7ua_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u7u] [1u7u_A]
  • SWISS-PROT database: [P0ABQ0]
  • Domain organization of [COABC_ECOLI] by SWISSPFAM
  • Other resources with information on 1U7U
  • Community annotation for 1U7U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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