1U7Z Ligase date Aug 04, 2004
title Phosphopantothenoylcysteine Synthetase From E. Coli, 4'- Phosphopantothenoyl-Cmp Complex
authors S.Stanitzek, M.A.Augustin, R.Huber, T.Kupke, S.Steinbacher
compound source
Molecule: Coenzyme A Biosynthesis Bifunctional Protein Coab
Chain: A, B, C
Fragment: Phosphopantothenoylcysteine Synthetase(Residues 1
Ec: 6.3.2.5
Engineered: Yes
Mutation: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.196 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.627 142.584 244.592 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand PMT enzyme Ligase E.C.6.3.2.5 BRENDA
related structures by homologous chain: 1U7U
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural Basis of CTP-Dependent Peptide Bond Formation in Coenzyme A Biosynthesis Catalyzed by Escherichia coli PPC Synthetase., Stanitzek S, Augustin MA, Huber R, Kupke T, Steinbacher S, Structure (Camb) 2004 Nov;12(11):1977-88. PMID:15530362
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (1u7z.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (1u7z.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 1U7Z
  • CSU: Contacts of Structural Units for 1U7Z
  • Likely Quarternary Molecular Structure file(s) for 1U7Z
  • Structure Factors (274 Kb)
  • Retrieve 1U7Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U7Z from S2C, [Save to disk]
  • Re-refined 1u7z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1U7Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1U7Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U7Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u7za_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1u7zb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1u7zc_, region C [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u7z_C] [1u7z_A] [1u7z] [1u7z_B]
  • SWISS-PROT database: [P0ABQ0]
  • Domain organization of [COABC_ECOLI] by SWISSPFAM
    • Other resources with information on 1U7Z
  • Community annotation for 1U7Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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