1U8F	Oxidoreductase	date	Aug 05, 2004
title	Crystal Structure Of Human Placental Glyceraldehyde-3-Phosph Dehydrogenase At 1.75 Resolution
authors	J.L.Jenkins, J.J.Tanner
compound		source
Molecule: Glyceraldehyde-3-Phosphate Dehydrogenase, Liver Chain: O, P, Q, R Synonym: Gapdh Ec: 1.2.1.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Placental Gene: Gapd Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-14b
symmetry	Space Group: P 21 21 21	R_factor 0.191 R_Free 0.217
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.953 125.651 132.329 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	NAD	enzyme	Oxidoreductase E.C.1.2.1.12 BRENDA
Gene Ontology	Chain Function Process Component Q, O, R, P
Primary reference	High-resolution structure of human D-glyceraldehyde-3-phosphate dehydrogenase., Jenkins JL, Tanner JJ, Acta Crystallogr D Biol Crystallogr. 2006 Mar;62(Pt 3):290-301. Epub 2006, Feb 22. PMID:16510976

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk] Biological Unit Coordinates (1u8f.pdb1.gz) 218 Kb LPC: Ligand-Protein Contacts for 1U8F CSU: Contacts of Structural Units for 1U8F Likely Quarternary Molecular Structure file(s) for 1U8F Structure Factors (1229 Kb) Retrieve 1U8F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U8F from S2C, [Save to disk] Re-refined 1u8f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1U8F in 3D

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Visual 3D analysis of 1U8F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U8F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u8f] [1u8f_O] [1u8f_Q] [1u8f_R] [1u8f_P] SWISS-PROT database: [P04406] Domain organization of [G3P_HUMAN] by SWISSPFAM Domain found in 1U8F: [Gp_dh_N ] by SMART

Other resources with information on 1U8F

Community annotation for 1U8F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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