1UA6	Immune System Hydrolase	date	Feb 28, 2003
title	Crystal Structure Of Hyhel-10 Fv Mutant Sfsf Complexed With White Lysozyme Complex
authors	I.Kumagai, Y.Nishimiya, H.Kondo, K.Tsumoto
compound		source
Molecule: Lysozyme Binding Ig Kappa Chain V23-J2 Region Chain: L Synonym: Lysozyme Antibody, Hyhel-10 Vl Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pktn2
Molecule: Ig Vh,Anti-Lysozyme Chain: H Synonym: Lysozyme Antibody, Hyhel-10 Vh Engineered: Yes Mutation: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pktn2
Molecule: Lysozyme C Chain: Y Synonym: C-Type Lysozyme, Hen Egg White Lysozyme Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Tissue: Egg White
symmetry	Space Group: P 41 21 2	R_factor 0.227 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.571 56.571 236.587 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand		enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1NDG, 1ORS, 1RHH
Gene Ontology	Chain Function Process Component Y
Primary reference	Structural consequences of target epitope-directed functional alteration of an antibody. The case of anti-hen lysozyme antibody, HyHEL-10., Kumagai I, Nishimiya Y, Kondo H, Tsumoto K, J Biol Chem 2003 Jul 4;278(27):24929-36. Epub 2003 Apr 22. PMID:12709438

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (1ua6.pdb1.gz) 57 Kb CSU: Contacts of Structural Units for 1UA6 Likely Quarternary Molecular Structure file(s) for 1UA6 Retrieve 1UA6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UA6 from S2C, [Save to disk]

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Visual 3D analysis of 1UA6

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UA6, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ua6h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1ua6l_, region L [Jmol] [rasmolscript] [script source]     - Domain d1ua6y_, region Y [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ua6_H] [1ua6_Y] [1ua6] [1ua6_L] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domains found in 1UA6: [IGv] [LYZ1 ] by SMART

Other resources with information on 1UA6

Community annotation for 1UA6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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